#!/bin/bash --login # #PBS -l select=1 #PBS -l walltime=00:05:00 #PBS -A z19-cse #PBS -N phmmer cd $PBS_O_WORKDIR export PATH=/home/y14/y14/$USER/hmmer/3.1b2/bin/phmmer:$PATH aprun -n 1 phmmer --cpu 1 --noali -E 1e-100 -o P01024_mammals.out P01024.fasta uniprot_sprot_mammals.dat